Publication Beamlines Strategic Pillar
Cook, Jonathan D.; Soto-Montoya, Hazel; Korpela, Markus K.; Lee, Jeffrey E. (2015). Electrostatic Architecture of the Infectious Salmon Anemia Virus (ISAV) Core Fusion Protein Illustrates a Carboxyl-Carboxylate pH Sensor. Journal of Biological Chemistry 290(30) , 18495-18504. 10.1074/jbc.m115.644781. [PDB: 4xyp] CMCF-ID Agriculture
Kim, Jitae; Kimber, Matthew S.; Nishimura, Kenji; Friso, Giulia; Schultz, Lance et al. (2015). Structures, Functions, and Interactions of ClpT1 and ClpT2 in the Clp Protease System of Arabidopsis Chloroplasts. Plant Cell 27(5) , 1477-1496. 10.1105/tpc.15.00106. [PDB: 4y0b] CMCF-ID Agriculture
Cappadocia, Laurent; Parent, Jean-Sébastien; Zampini, Éric; Lepage, Étienne; Sygusch, Jurgen et al. (2011). A conserved lysine residue of plant Whirly proteins is necessary for higher order protein assembly and protection against DNA damage. Nucleic Acids Research 40(1) , 258-269. 10.1093/nar/gkr740. [PDB: 3r9y] CMCF-ID Agriculture
Phenix, Christopher P.; Nienaber, Kurt; Tam, Pui Hang; Delbaere, Louis T. J.; Palmer, David R. J. et al. (2008). Structural, Functional and Calorimetric Investigation of MosA, a Dihydrodipicolinate Synthase fromSinorhizobium melilotiL5–30, does not Support Involvement in Rhizopine Biosynthesis. ChemBioChem 9(10) , 1591-1602. 10.1002/cbic.200700569. [PDB: 2vc6] CMCF-ID Agriculture
Keeling, Thomas J.; Samborska, Bożena; Demers, Ryan W.; Kimber, Matthew S. (2014). Interactions and structural variability of β-carboxysomal shell protein CcmL. Photosynthesis Research 121(2-3) , 125-133. 10.1007/s11120-014-9973-z. [PDB: 4n8f, 4n8x] CMCF-ID Agriculture
Saer, Rafael G.; Hardjasa, Amelia; Rosell, Federico I.; Mauk, A. Grant; Murphy, Michael E. P. et al. (2013). Role of Rhodobacter sphaeroides Photosynthetic Reaction Center Residue M214 in the Composition, Absorbance Properties, and Conformations of HA and BA Cofactors. Biochemistry 52(13) , 2206-2217. 10.1021/bi400207m. [PDB: 4in5] CMCF-ID Agriculture
Hoover, Gordon J.; Jørgensen, René; Rochon, Amanda; Bajwa, Vikramjit S.; Merrill, A. Rod et al. (2013). Identification of catalytically important amino acid residues for enzymatic reduction of glyoxylate in plants. Biochimica et Biophysica Acta - Proteins and Proteomics 1834(12) , 2663-2671. 10.1016/j.bbapap.2013.09.013. CMCF-ID Agriculture
Rolfe, Nicolas; Myskiw, Dustin; Patton, Matthew T.; Forrester, Taylor J. B.; Kimber, Matthew S. et al. (2025). Sad from Proteobacteria is a Structurally Distinct ALDH3 Enzyme Specialized for the Oxidation of Steroidal Aldehydes. Biochemistry 64(17) , 3735-3744. 10.1021/acs.biochem.5c00213. [PDB: 9nxl] CMCF-BM Agriculture
Rolfe, Nicolas; Schroeter, Kurt L.; Forrester, Taylor JB.; Kimber, Matthew S.; Seah, Stephen YK. et al. (2025). Sal is a proteobacterial bile acid aldolase that repurposes key thiolase catalytic residues for retroaldol cleavage of C5 steroid side chains. Journal of Biological Chemistry 301(8) , 110439. 10.1016/j.jbc.2025.110439. [PDB: 9myr] CMCF-BM Agriculture
Hamdorf, Matthias; Imhof, Thomas; Bailey-Elkin, Ben; Betz, Janina; Theobald, Sebastian J et al. (2023). The unique ORF8 protein from SARS-CoV-2 binds to human dendritic cells and induces a hyper-inflammatory cytokine storm. Journal of Molecular Cell Biology 15(10) . 10.1093/jmcb/mjad062. CMCF-BM Agriculture
Dodda, Leela S.; Campos, Sebastien; Ciccone, David; Carreiro, Samantha; Leit, Silvana et al. (2025). Knowledge and Structure-Based Drug Design of 15-PGDH Inhibitors. Journal of Medicinal Chemistry 68(17) , 18436-18462. 10.1021/acs.jmedchem.5c01231. [PDB: 9pfl] CMCF-BM Agriculture
Barghash, Marim M.; Mabanglo, Mark F.; Hoff, Samuel E.; Brozdnychenko, Dmytro; Wong, Keith S. et al. (2025). Small molecule dysregulation of ClpP activity via bidirectional allosteric pathways. Structure . 10.1016/j.str.2025.07.013. [PDB: 9mjp] CMCF-BM Agriculture
Tran, Norman; Frenette, Aaron; Holyoak, Todd (2025). Structure of the Thomasclavelia ramosa immunoglobulin A protease reveals a modular and minimizable architecture distinct from other immunoglobulin A proteases. Proceedings of the National Academy of Sciences of the United States of America 122(35) . 10.1073/pnas.2503549122. [PDB: 9ekk, 9ekm, 9ekn] CMCF-BM Agriculture
Vergunst, Kathleen L.; Langelaan, David N. (2022). The N-terminal tail of the hydrophobin SC16 is not required for rodlet formation. Scientific Reports 12(1) . 10.1038/s41598-021-04223-6. CMCF-BM Agriculture
Jones, Darryl R.; Xing, Xiaohui; Tingley, Jeffrey P.; Klassen, Leeann; King, Marissa L. et al. (2020). Analysis of Active Site Architecture and Reaction Product Linkage Chemistry Reveals a Conserved Cleavage Substrate for an Endo-alpha-mannanase within Diverse Yeast Mannans. Journal of Molecular Biology 432(4) , 1083-1097. 10.1016/j.jmb.2019.12.048. [PDB: 6u4z] CMCF-BM Agriculture