Publication Beamlines Strategic Pillar
Vance, Tyler D.R.; Ye, Qilu; Conroy, Brigid; Davies, Peter L. (2020). Essential role of calcium in extending RTX adhesins to their target. Journal of Structural Biology: X 4, 100036. 10.1016/j.yjsbx.2020.100036. [PDB: 6xi1, 6xi3] CMCF-ID Health
Vance, Tyler D. R.; Guo, Shuaiqi; Assaie-Ardakany, Shayan; Conroy, Brigid; Davies, Peter L. et al. (2019). Structure and functional analysis of a bacterial adhesin sugar-binding domain. PLoS ONE 14(7) , e0220045. 10.1371/journal.pone.0220045. [PDB: 6m8m] CMCF-ID Health
Vance, Tyler D.R.; Graham, Laurie A.; Davies, Peter L. (2018). An ice‐binding and tandem beta‐sandwich domain‐containing protein in Shewanella frigidimarina is a potential new type of ice adhesin. FEBS Journal 285(8) , 1511-1527. 10.1111/febs.14424. [PDB: 6bg8] CMCF-BM Health
Vallée, Frédéric; Casás-Selves, Matias; Bubenik, Monica; Duplessis, Martin; Sow, Boubacar et al. (2025). Discovery of RP-1664: A First-in-Class Orally Bioavailable, Selective PLK4 Inhibitor. Journal of Medicinal Chemistry . 10.1021/acs.jmedchem.5c00529. [PDB: 9o63] CMCF-ID Health
Vadlamani, Grishma; Thomas, Misty D.; Patel, Trushar R.; Donald, Lynda J.; Reeve, Thomas M. et al. (2015). The β-Lactamase Gene Regulator AmpR Is a Tetramer That Recognizes and Binds the d-Ala-d-Ala Motif of Its Repressor UDP-N-acetylmuramic Acid (MurNAc)-pentapeptide. Journal of Biological Chemistry 290(5) , 2630-2643. 10.1074/jbc.m114.618199. [PDB: 4wkm] CMCF-ID Health
Vadlamani, Grishma; Stubbs, Keith A.; Désiré, Jérôme; Blériot, Yves; Vocadlo, David J. et al. (2017). Conformational flexibility of the glycosidase NagZ allows it to bind structurally diverse inhibitors to suppress β-lactam antibiotic resistance. Protein Science 26(6) , 1161-1170. 10.1002/pro.3166. [PDB: 5utr] CMCF-BM Health
Ulaganathan, ThirumalaiSelvi; Shi, Rong; Yao, Deqiang; Gu, Ruo-Xu; Garron, Marie-Line et al. (2016). Conformational flexibility of PL12 family heparinases: structure and substrate specificity of heparinase III fromBacteroides thetaiotaomicron(BT4657). Glycobiology 27(2) , 176-187. 10.1093/glycob/cww096. [PDB: 5jmd, 5jmf] CMCF-ID Health
Ulaganathan, ThirumalaiSelvi; Helbert, William; Kopel, Moran; Banin, Ehud; Cygler, Miroslaw et al. (2018). Structure–function analyses of a PL24 family ulvan lyase reveal key features and suggest its catalytic mechanism. Journal of Biological Chemistry 293(11) , 4026-4036. 10.1074/jbc.ra117.001642. [PDB: 6byp, 6byt, 6byx] CMCF-BM, CMCF-ID Health
Ulaganathan, ThirumalaiSelvi; Helbert, William; Kopel, Moran; Banin, Ehud; Cygler, Miroslaw et al. (2018). Structure–function analyses of a PL24 family ulvan lyase reveal key features and suggest its catalytic mechanism. Journal of Biological Chemistry 293(11) , 4026-4036. 10.1074/jbc.ra117.001642. [PDB: 6byp, 6byt, 6byx] CMCF-BM, CMCF-ID Health
Ulaganathan, ThirumalaiSelvi; Boniecki, Michal T.; Foran, Elizabeth; Buravenkov, Vitaliy; Mizrachi, Naama et al. (2017). New Ulvan-Degrading Polysaccharide Lyase Family: Structure and Catalytic Mechanism Suggests Convergent Evolution of Active Site Architecture. ACS Chemical Biology 12(5) , 1269-1280. 10.1021/acschembio.7b00126. [PDB: 5uam, 5uas] CMCF-BM Health
Ulaganathan, ThirumalaiSelvi; Banin, Ehud; Helbert, William; Cygler, Miroslaw (2018). Structural and functional characterization of PL28 family ulvan lyase NLR48 from Nonlabens ulvanivorans. Journal of Biological Chemistry 293(29) , 11564-11573. 10.1074/jbc.ra118.003659. [PDB: 6d2c, 6d3u] CMCF-BM, CMCF-ID Health
Ulaganathan, ThirumalaiSelvi; Banin, Ehud; Helbert, William; Cygler, Miroslaw (2018). Structural and functional characterization of PL28 family ulvan lyase NLR48 from Nonlabens ulvanivorans. Journal of Biological Chemistry 293(29) , 11564-11573. 10.1074/jbc.ra118.003659. [PDB: 6d2c, 6d3u] CMCF-BM, CMCF-ID Health
Ukpabi, Georgia; Takayama, Shin-ichi J.; Mauk, A.Grant; Murphy, Michael E.P. (2012). Inactivation of the Heme Degrading Enzyme IsdI by an Active Site Substitution That Diminishes Heme Ruffling. Journal of Biological Chemistry 287(41) , 34179-34188. 10.1074/jbc.m112.393249. [PDB: 4fnh] CMCF-ID Health
Tyvanchuk, Yuriy B.; Fecica, Matthew; Garcia, Griheydi; Mar, Arthur; Oliynyk, Anton O. et al. (2021). Ternary Rare-Earth-Metal Nickel Indides RE23Ni7In4 (RE = Gd, Tb, Dy) with Yb23Cu7Mg4-Type Structure. Inorganic Chemistry 60(23) , 17900-17910. 10.1021/acs.inorgchem.1c02486. CMCF-BM Environment
Turgeon, Zachari; White, Dawn; Jørgensen, René; Visschedyk, Danielle; Fieldhouse, Robert J. et al. (2009). Yeast as a tool for characterizing mono-ADP-ribosyltransferase toxins. FEMS Microbiology Letters 300(1) , 97-106. 10.1111/j.1574-6968.2009.01777.x. [PDB: 3ess] CMCF-ID Health